RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g56350.1 View Network Show in Genome Browser |
| Other Names | Os04g0658600 |
| Description | nucleolar protein,Nop52 containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33589832-33591841 Nucleotide Length: 1677 |
| Protein-coding | LOC_Os04g56350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g33050 LOC_Os03g49210 LOC_Os01g27730 LOC_Os03g22350 LOC_Os03g61560 LOC_Os03g58810 LOC_Os01g33030 LOC_Os04g02730 LOC_Os01g67134 LOC_Os02g57590 LOC_Os02g49270 More.. |
| Downstream Genes | LOC_Os07g47580 LOC_Os05g48422 LOC_Os10g35280 LOC_Os07g19190 LOC_Os06g09570 LOC_Os07g25440 LOC_Os07g47420 LOC_Os08g32090 LOC_Os05g08360 LOC_Os07g01920 LOC_Os12g29660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g56350.1 |
| Rice Genome Annotation | LOC_Os04g56350.1 |
| Ricechip | LOC_Os04g56350.1 |
| KEGG | osa:4337268 dosa:Os04t0658600-02 |
| Entrez-Gene | 4337268 |