RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g56480.2 View Network Show in Genome Browser |
| Other Names | Os04g0659900 |
| Description | pelota, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33665023-33672967 Nucleotide Length: 1008 |
| Protein-coding | LOC_Os04g56480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g49210 LOC_Os03g49580 LOC_Os02g53680 LOC_Os03g51900 LOC_Os03g22320 LOC_Os02g10070 LOC_Os02g56014 LOC_Os01g71270 LOC_Os01g62040 LOC_Os01g73530 LOC_Os01g34200 More.. |
| Downstream Genes | LOC_Os07g39870 LOC_Os07g29320 LOC_Os11g33240 LOC_Os06g07580 LOC_Os07g08170 LOC_Os05g31020 LOC_Os07g19460 LOC_Os05g01700 LOC_Os12g37400 LOC_Os05g43770 LOC_Os05g29860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g56480.2 |
| Rice Genome Annotation | LOC_Os04g56480.2 |
| Ricechip | LOC_Os04g56480.2 |
| KEGG | osa:9269039 dosa:Os04t0659900-02 |
| Entrez-Gene | 9269039 |