RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g56520.1 View Network Show in Genome Browser |
| Other Names | Os04g0660400 |
| Description | alpha-1,4-glucan-protein synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33704884-33707346 Nucleotide Length: 1044 |
| Protein-coding | LOC_Os04g56520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g18070 LOC_Os01g68710 LOC_Os01g08450 |
| Downstream Genes | LOC_Os05g06430 LOC_Os12g03060 LOC_Os07g06550 LOC_Os11g37480 LOC_Os05g48020 LOC_Os06g37160 LOC_Os05g24601 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g56520.1 |
| Rice Genome Annotation | LOC_Os04g56520.1 |
| Ricechip | LOC_Os04g56520.1 |
| KEGG | osa:4337282 dosa:Os04t0660400-01 |
| Entrez-Gene | 4337282 |