RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g56590.1 View Network Show in Genome Browser |
| Other Names | Os04g0661300 |
| Description | ATP/GTP binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33740372-33746973 Nucleotide Length: 1041 |
| Protein-coding | LOC_Os04g56590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g27760 LOC_Os02g14059 LOC_Os03g13170 LOC_Os02g47140 LOC_Os04g50990 LOC_Os01g10820 LOC_Os01g49290 LOC_Os02g56990 LOC_Os02g02130 LOC_Os03g58050 LOC_Os03g14990 More.. |
| Downstream Genes | LOC_Os07g10720 LOC_Os09g39500 LOC_Os07g08330 LOC_Os06g35730 LOC_Os05g11710 LOC_Os08g05570 LOC_Os06g07210 LOC_Os07g07709 LOC_Os05g37330 LOC_Os08g03450 LOC_Os11g20790 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g56590.1 |
| Rice Genome Annotation | LOC_Os04g56590.1 |
| Ricechip | LOC_Os04g56590.1 |
| KEGG | osa:4337287 dosa:Os04t0661300-01 |
| Entrez-Gene | 4337287 |