RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g56620.1 View Network Show in Genome Browser |
| Other Names | Os04g0661600 |
| Description | molybdopterin biosynthesis protein CNX1, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33761378-33764576 Nucleotide Length: 1356 |
| Protein-coding | LOC_Os04g56620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g38700 LOC_Os04g56610 LOC_Os02g15870 LOC_Os04g39270 LOC_Os03g03450 LOC_Os02g56050 LOC_Os03g18380 LOC_Os02g13840 LOC_Os02g04740 LOC_Os01g14610 LOC_Os01g42850 More.. |
| Downstream Genes | LOC_Os12g32230 LOC_Os06g12250 LOC_Os09g08130 LOC_Os08g23150 LOC_Os07g39780 LOC_Os08g05830 LOC_Os07g49230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g56620.1 |
| Rice Genome Annotation | LOC_Os04g56620.1 |
| Ricechip | LOC_Os04g56620.1 |
| KEGG | osa:9272561 dosa:Os04t0661600-03 |
| Entrez-Gene | 9272561 |