RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g56670.1 View Network Show in Genome Browser |
| Other Names | Os04g0662100 |
| Description | S4 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33784365-33786454 Nucleotide Length: 453 |
| Protein-coding | LOC_Os04g56670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52470 LOC_Os03g58050 LOC_Os04g54820 LOC_Os02g06700 LOC_Os02g33140 LOC_Os04g02150 LOC_Os02g02360 LOC_Os02g54110 LOC_Os02g26850 LOC_Os04g46310 LOC_Os04g50660 More.. |
| Downstream Genes | LOC_Os09g18320 LOC_Os08g05880 LOC_Os12g03822 LOC_Os11g03990 LOC_Os06g43690 LOC_Os07g33340 LOC_Os07g07709 LOC_Os07g07719 LOC_Os09g30210 LOC_Os12g04010 LOC_Os07g40930 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g56670.1 |
| Rice Genome Annotation | LOC_Os04g56670.1 |
| Ricechip | LOC_Os04g56670.1 |
| KEGG | osa:4337293 dosa:Os04t0662100-01 |
| Entrez-Gene | 4337293 |