RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g56800.1 View Network Show in Genome Browser |
| Other Names | Os04g0663800 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33873455-33876112 Nucleotide Length: 705 |
| Protein-coding | LOC_Os04g56800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04240 LOC_Os02g03060 LOC_Os03g44484 LOC_Os02g47150 LOC_Os02g53230 LOC_Os01g11070 LOC_Os03g10940 LOC_Os03g21270 LOC_Os02g06640 LOC_Os03g19510 LOC_Os02g52360 More.. |
| Downstream Genes | LOC_Os07g48810 LOC_Os06g41750 LOC_Os05g05860 LOC_Os06g10620 LOC_Os07g02350 LOC_Os10g41520 LOC_Os06g38470 LOC_Os10g34380 LOC_Os09g02284 LOC_Os07g31280 LOC_Os06g11320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g56800.1 |
| Rice Genome Annotation | LOC_Os04g56800.1 |
| Ricechip | LOC_Os04g56800.1 |
| KEGG | osa:4337307 dosa:Os04t0663800-01 |
| Entrez-Gene | 4337307 |