RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g57230.1 View Network Show in Genome Browser |
| Other Names | Os04g0667900 |
| Description | regulatory protein RecX family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34091609-34095419 Nucleotide Length: 831 |
| Protein-coding | LOC_Os04g57230 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67510 LOC_Os03g43850 LOC_Os01g71690 LOC_Os01g03030 LOC_Os01g08540 |
| Downstream Genes | LOC_Os11g19720 LOC_Os11g04954 LOC_Os12g31370 LOC_Os12g04980 LOC_Os11g40150 LOC_Os10g10244 LOC_Os06g13660 LOC_Os07g15440 LOC_Os05g03050 LOC_Os05g41880 LOC_Os04g58630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g57230.1 |
| Rice Genome Annotation | LOC_Os04g57230.1 |
| Ricechip | LOC_Os04g57230.1 |
| KEGG | osa:4337332 dosa:Os04t0667900-01 |
| Entrez-Gene | 4337332 |