RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g57300.1 View Network Show in Genome Browser |
| Other Names | Os04g0668700 |
| Description | phosphatidylinositol 3- and 4-kinase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34114118-34116955 Nucleotide Length: 1818 |
| Protein-coding | LOC_Os04g57300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g50320 LOC_Os03g52794 LOC_Os01g01689 |
| Downstream Genes | LOC_Os11g10420 LOC_Os08g21590 LOC_Os07g45064 LOC_Os06g50910 LOC_Os05g08810 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 osa-miR2099-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g57300.1 |
| Rice Genome Annotation | LOC_Os04g57300.1 |
| Ricechip | LOC_Os04g57300.1 |
| KEGG | osa:4337337 dosa:Os04t0668700-01 |
| Entrez-Gene | 4337337 |