RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g57380.1 View Network Show in Genome Browser |
| Other Names | Os04g0669600 |
| Description | acyl-protein thioesterase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34150894-34152494 Nucleotide Length: 708 |
| Protein-coding | LOC_Os04g57380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g09770 LOC_Os01g49510 LOC_Os02g55330 LOC_Os04g42520 LOC_Os02g40010 |
| Downstream Genes | LOC_Os07g41730 LOC_Os12g18860 LOC_Os06g42730 LOC_Os08g38092 LOC_Os08g06420 LOC_Os07g30150 LOC_Os05g26890 LOC_Os12g39860 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g57380.1 |
| Rice Genome Annotation | LOC_Os04g57380.1 |
| Ricechip | LOC_Os04g57380.1 |
| KEGG | osa:4337345 dosa:Os04t0669600-01 |
| Entrez-Gene | 4337345 |