RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g57410.1 View Network Show in Genome Browser |
| Other Names | Os04g0669900 |
| Description | methylthioribose kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34161729-34164361 Nucleotide Length: 1284 |
| Protein-coding | LOC_Os04g57410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g57400 LOC_Os03g13390 LOC_Os03g44310 |
| Downstream Genes | LOC_Os12g31380 LOC_Os11g11050 LOC_Os10g25320 LOC_Os12g42260 LOC_Os11g29370 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn01100 |
| Metacyc Pathways | PWY-4361 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g57410.1 |
| Rice Genome Annotation | LOC_Os04g57410.1 |
| Ricechip | LOC_Os04g57410.1 |
| KEGG | dosa:Os04t0669900-00 |