RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g57480.1 View Network Show in Genome Browser |
| Other Names | Os04g0670400 |
| Description | OTU-like cysteine protease family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34201019-34205682 Nucleotide Length: 1215 |
| Protein-coding | LOC_Os04g57480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g06890 LOC_Os04g52850 LOC_Os04g33780 LOC_Os02g08544 |
| Downstream Genes | LOC_Os06g10340 LOC_Os05g15890 LOC_Os09g31280 LOC_Os08g39560 LOC_Os08g42020 LOC_Os08g42540 LOC_Os06g21560 LOC_Os07g03770 LOC_Os05g03884 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g57480.1 |
| Rice Genome Annotation | LOC_Os04g57480.1 |
| Ricechip | LOC_Os04g57480.1 |
| KEGG | osa:4337352 dosa:Os04t0670400-02 |
| Entrez-Gene | 4337352 |