RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g57500.1 View Network Show in Genome Browser |
| Other Names | Os04g0670700 |
| Description | phosphatidate cytidylyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34209234-34211093 Nucleotide Length: 945 |
| Protein-coding | LOC_Os04g57500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g36910 |
| Downstream Genes | LOC_Os04g57510 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 rn01100 |
| Metacyc Pathways | PHOSLIPSYN2-PWY PHOSLIPSYN-PWY PWY-5269 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g57500.1 |
| Rice Genome Annotation | LOC_Os04g57500.1 |
| Ricechip | LOC_Os04g57500.1 |
| KEGG | osa:4337355 dosa:Os04t0670700-01 |
| Entrez-Gene | 4337355 |