RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g57930.1 View Network Show in Genome Browser |
| Other Names | Os04g0676100 |
| Description | thioredoxin, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34513582-34515350 Nucleotide Length: 543 |
| Protein-coding | LOC_Os04g57930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35900 LOC_Os01g42960 LOC_Os02g07230 |
| Downstream Genes | LOC_Os05g47930 LOC_Os12g37960 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g57930.1 |
| Rice Genome Annotation | LOC_Os04g57930.1 |
| Ricechip | LOC_Os04g57930.1 |
| KEGG | osa:4337394 dosa:Os04t0676100-01 |
| Entrez-Gene | 4337394 |