RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g57950.1 View Network Show in Genome Browser |
| Other Names | Os04g0676300 |
| Description | dihydroorotate dihydrogenase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34519564-34523579 Nucleotide Length: 1410 |
| Protein-coding | LOC_Os04g57950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g50350 LOC_Os03g36630 LOC_Os01g38970 LOC_Os01g72240 LOC_Os01g72250 LOC_Os03g56800 LOC_Os01g27520 LOC_Os02g12650 LOC_Os04g17050 LOC_Os02g04700 LOC_Os02g14110 More.. |
| Downstream Genes | LOC_Os08g44860 LOC_Os07g30200 LOC_Os12g22600 LOC_Os07g10540 LOC_Os09g38772 LOC_Os09g38777 LOC_Os09g37610 LOC_Os06g45860 LOC_Os06g35540 LOC_Os11g01490 LOC_Os12g01500 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 |
| Metacyc Pathways | PWY0-162 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g57950.1 |
| Rice Genome Annotation | LOC_Os04g57950.1 |
| Ricechip | LOC_Os04g57950.1 |
| KEGG | osa:4337396 dosa:Os04t0676300-01 |
| Entrez-Gene | 4337396 |