RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g58070.1 View Network Show in Genome Browser |
| Other Names | Os04g0677100 |
| Description | aspartic proteinase nepenthesin precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34586366-34588232 Nucleotide Length: 1329 |
| Protein-coding | LOC_Os04g58070 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g30420 LOC_Os01g68840 LOC_Os01g56930 |
| Downstream Genes | LOC_Os11g44810 LOC_Os11g23790 LOC_Os08g36530 LOC_Os05g22730 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1436 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g58070.1 |
| Rice Genome Annotation | LOC_Os04g58070.1 |
| Ricechip | LOC_Os04g58070.1 |
| KEGG | osa:4337402 dosa:Os04t0677100-00 |
| Entrez-Gene | 4337402 |