RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g58090.1 View Network Show in Genome Browser |
| Other Names | Os04g0677300 |
| Description | harpin-induced protein 1 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34597645-34598781 Nucleotide Length: 768 |
| Protein-coding | LOC_Os04g58090 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g20980 LOC_Os02g35870 LOC_Os01g25386 LOC_Os03g01180 LOC_Os02g32490 LOC_Os02g55134 LOC_Os01g59110 LOC_Os01g59100 LOC_Os03g05520 LOC_Os02g08180 LOC_Os02g44510 More.. |
| Downstream Genes | LOC_Os05g23260 LOC_Os11g40090 LOC_Os08g39140 LOC_Os05g40420 LOC_Os06g15370 LOC_Os09g30418 LOC_Os08g17680 LOC_Os09g30412 LOC_Os06g16260 LOC_Os06g05740 LOC_Os09g20090 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g58090.1 |
| Rice Genome Annotation | LOC_Os04g58090.1 |
| Ricechip | LOC_Os04g58090.1 |
| KEGG | osa:4337404 dosa:Os04t0677300-01 |
| Entrez-Gene | 4337404 |