RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g58180.1 View Network Show in Genome Browser |
| Other Names | Os04g0678300 |
| Description | WD-40 repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34649540-34655216 Nucleotide Length: 2460 |
| Protein-coding | LOC_Os04g58180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54590 LOC_Os02g04320 LOC_Os01g39250 LOC_Os03g53720 LOC_Os01g39260 LOC_Os01g74030 LOC_Os02g35010 LOC_Os02g22780 LOC_Os03g51020 LOC_Os04g40940 LOC_Os01g08560 More.. |
| Downstream Genes | LOC_Os06g35814 LOC_Os06g05800 LOC_Os05g44070 LOC_Os09g15790 LOC_Os05g01780 LOC_Os05g48980 LOC_Os06g24870 LOC_Os08g01794 LOC_Os06g47300 LOC_Os07g06820 LOC_Os05g48422 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g58180.1 |
| Rice Genome Annotation | LOC_Os04g58180.1 |
| Ricechip | LOC_Os04g58180.1 |
| KEGG | osa:4337413 dosa:Os04t0678300-01 |
| Entrez-Gene | 4337413 |