RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g58590.1 View Network Show in Genome Browser |
| Other Names | Os04g0682400 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34832040-34837343 Nucleotide Length: 3039 |
| Protein-coding | LOC_Os04g58590 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g52140 LOC_Os03g04780 LOC_Os03g59550 LOC_Os02g11750 LOC_Os03g17010 LOC_Os02g16860 LOC_Os02g39890 |
| Downstream Genes | LOC_Os06g20010 LOC_Os06g11620 LOC_Os09g29980 LOC_Os09g33870 LOC_Os05g04850 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g58590.1 |
| Rice Genome Annotation | LOC_Os04g58590.1 |
| Ricechip | LOC_Os04g58590.1 |
| KEGG | osa:4337438 dosa:Os04t0682400-01 |
| Entrez-Gene | 4337438 |