RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g58620.1 View Network Show in Genome Browser |
| Other Names | Os04g0682800 |
| Description | potasium efflux antiporter protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34860360-34869589 Nucleotide Length: 3465 |
| Protein-coding | LOC_Os04g58620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02640 LOC_Os04g55180 LOC_Os03g36750 LOC_Os01g68450 LOC_Os01g72950 LOC_Os04g44650 LOC_Os02g42570 LOC_Os02g28720 LOC_Os01g48300 LOC_Os01g66000 LOC_Os03g31490 More.. |
| Downstream Genes | LOC_Os08g30930 LOC_Os08g19140 LOC_Os10g35180 LOC_Os08g38460 LOC_Os07g47540 LOC_Os11g47730 LOC_Os07g05470 LOC_Os05g35410 LOC_Os07g06660 LOC_Os05g30900 LOC_Os09g37020 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g58620.1 |
| Rice Genome Annotation | LOC_Os04g58620.1 |
| Ricechip | LOC_Os04g58620.1 |
| KEGG | osa:4337441 dosa:Os04t0682800-01 |
| Entrez-Gene | 4337441 |