RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g58710.1 View Network Show in Genome Browser |
| Other Names | Os04g0683700 |
| Description | AMP-binding domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34908441-34910661 Nucleotide Length: 1557 |
| Protein-coding | LOC_Os04g58710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56800 LOC_Os03g16110 |
| Downstream Genes | LOC_Os05g46570 LOC_Os08g41730 LOC_Os09g32800 LOC_Os08g33710 LOC_Os11g06750 LOC_Os12g07010 LOC_Os10g27190 LOC_Os07g32880 LOC_Os07g37240 LOC_Os09g24690 LOC_Os08g06040 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g58710.1 |
| Rice Genome Annotation | LOC_Os04g58710.1 |
| Ricechip | LOC_Os04g58710.1 |
| KEGG | osa:4337447 dosa:Os04t0683700-01 |
| Entrez-Gene | 4337447 |