RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g58830.1 View Network Show in Genome Browser |
| Other Names | Os04g0685100 |
| Description | ribosome biogenesis regulatory protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 34991957-34994799 Nucleotide Length: 993 |
| Protein-coding | LOC_Os04g58830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g22350 LOC_Os02g26850 LOC_Os01g68310 LOC_Os02g54110 LOC_Os01g48210 LOC_Os03g22880 LOC_Os01g08770 LOC_Os01g33030 LOC_Os02g50370 LOC_Os03g22890 LOC_Os01g57910 More.. |
| Downstream Genes | LOC_Os07g33340 LOC_Os05g01990 LOC_Os09g30210 LOC_Os05g49230 LOC_Os10g42320 LOC_Os11g19250 LOC_Os09g18320 LOC_Os07g47420 LOC_Os05g42300 LOC_Os07g29320 LOC_Os06g09570 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g58830.1 |
| Rice Genome Annotation | LOC_Os04g58830.1 |
| Ricechip | LOC_Os04g58830.1 |
| KEGG | osa:4337459 dosa:Os04t0685100-01 |
| Entrez-Gene | 4337459 |