RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g58860.1 View Network Show in Genome Browser |
| Other Names | Os04g0685400 |
| Description | harpin-induced protein 1 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 35010940-35012452 Nucleotide Length: 663 |
| Protein-coding | LOC_Os04g58860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52630 LOC_Os01g25560 LOC_Os03g14170 LOC_Os03g03164 LOC_Os01g11710 LOC_Os04g48230 LOC_Os01g71280 LOC_Os04g40730 LOC_Os01g71474 LOC_Os02g43280 LOC_Os04g42620 More.. |
| Downstream Genes | LOC_Os04g58870 LOC_Os11g30360 LOC_Os06g06250 LOC_Os12g38360 LOC_Os11g26190 LOC_Os08g32160 LOC_Os09g25850 LOC_Os10g42620 LOC_Os12g34524 LOC_Os07g01370 LOC_Os12g37650 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g58860.1 |
| Rice Genome Annotation | LOC_Os04g58860.1 |
| Ricechip | LOC_Os04g58860.1 |
| KEGG | osa:4337462 dosa:Os04t0685400-01 |
| Entrez-Gene | 4337462 |