RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g58880.1 View Network Show in Genome Browser |
| Other Names | Os04g0685600 |
| Description | exo70 exocyst complex subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 35021615-35028169 Nucleotide Length: 1905 |
| Protein-coding | LOC_Os04g58880 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g54940 LOC_Os03g58970 LOC_Os04g34450 LOC_Os03g14260 LOC_Os03g06760 LOC_Os01g45439 |
| Downstream Genes | LOC_Os10g32880 LOC_Os07g10110 LOC_Os08g22864 LOC_Os06g11280 LOC_Os06g11240 LOC_Os06g11210 LOC_Os06g11200 LOC_Os06g11290 LOC_Os12g13590 LOC_Os07g07000 LOC_Os07g09680 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g58880.1 |
| Rice Genome Annotation | LOC_Os04g58880.1 |
| Ricechip | LOC_Os04g58880.1 |
| KEGG | osa:4337464 dosa:Os04t0685600-01 |
| Entrez-Gene | 4337464 |