RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g58900.1 View Network Show in Genome Browser |
| Other Names | Os04g0685800 |
| Description | hydrolase, NUDIX family, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 35034826-35038350 Nucleotide Length: 681 |
| Protein-coding | LOC_Os04g58900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g59580 LOC_Os02g50130 LOC_Os02g32060 LOC_Os04g46280 LOC_Os02g55030 LOC_Os02g56210 LOC_Os02g57060 LOC_Os04g51786 LOC_Os03g58540 LOC_Os02g15900 LOC_Os01g47450 More.. |
| Downstream Genes | LOC_Os08g28840 LOC_Os06g04910 LOC_Os06g03910 LOC_Os12g26060 LOC_Os11g29390 LOC_Os06g21380 LOC_Os07g36190 LOC_Os05g37434 LOC_Os08g31228 LOC_Os08g31219 LOC_Os05g48410 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g58900.1 |
| Rice Genome Annotation | LOC_Os04g58900.1 |
| Ricechip | LOC_Os04g58900.1 |
| KEGG | osa:4337466 dosa:Os04t0685800-01 |
| Entrez-Gene | 4337466 |