RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g59040.1 View Network Show in Genome Browser |
| Other Names | Os04g0687100 |
| Description | soluble inorganic pyrophosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 35120685-35124131 Nucleotide Length: 642 |
| Protein-coding | LOC_Os04g59040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g41590 LOC_Os01g50934 LOC_Os01g54910 |
| Downstream Genes | LOC_Os05g08950 LOC_Os06g09630 LOC_Os12g28177 LOC_Os12g28137 |
| Pathways | |
|---|---|
| Metacyc Pathways | P61-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g59040.1 |
| Rice Genome Annotation | LOC_Os04g59040.1 |
| Ricechip | LOC_Os04g59040.1 |
| KEGG | osa:4337476 dosa:Os04t0687100-01 |
| Entrez-Gene | 4337476 |