RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g59560.1 View Network Show in Genome Browser |
| Other Names | Os04g0692100 |
| Description | tubulin folding cofactor B, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 35422986-35426837 Nucleotide Length: 741 |
| Protein-coding | LOC_Os04g59560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g29469 LOC_Os03g51600 LOC_Os01g56490 LOC_Os02g03110 LOC_Os02g39890 LOC_Os01g19400 LOC_Os03g01850 LOC_Os03g17930 LOC_Os01g59990 LOC_Os02g04660 LOC_Os03g22700 More.. |
| Downstream Genes | LOC_Os05g01500 LOC_Os11g14220 LOC_Os12g30540 LOC_Os11g36470 LOC_Os05g46230 LOC_Os07g06950 LOC_Os08g25590 LOC_Os07g26700 LOC_Os07g38730 LOC_Os09g25640 LOC_Os05g40820 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g59560.1 |
| Rice Genome Annotation | LOC_Os04g59560.1 |
| Ricechip | LOC_Os04g59560.1 |
| KEGG | osa:4337511 dosa:Os04t0692100-01 |
| Entrez-Gene | 4337511 |