RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g59630.1 View Network Show in Genome Browser |
| Other Names | Os04g0692800 |
| Description | prenylcysteine oxidase 1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 35462549-35463100 Nucleotide Length: 504 |
| Protein-coding | LOC_Os04g59630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g18320 LOC_Os02g51880 LOC_Os02g05680 LOC_Os01g51320 LOC_Os03g62510 LOC_Os01g21380 LOC_Os04g47270 LOC_Os02g43220 LOC_Os02g47800 LOC_Os02g47790 LOC_Os02g37010 More.. |
| Downstream Genes | LOC_Os12g43590 LOC_Os08g05570 LOC_Os10g40570 LOC_Os11g05970 LOC_Os08g04780 LOC_Os12g35890 LOC_Os08g44340 LOC_Os09g39380 LOC_Os07g02100 LOC_Os07g02140 LOC_Os07g02120 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g59630.1 |
| Rice Genome Annotation | LOC_Os04g59630.1 |
| Ricechip | LOC_Os04g59630.1 |
| KEGG | osa:4337518 dosa:Os04t0692800-00 |
| Entrez-Gene | 4337518 |