RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01030.1 View Network Show in Genome Browser |
| Other Names | Os05g0100600 |
| Description | phospholipid-transporting ATPase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 60821-65059 Nucleotide Length: 3570 |
| Protein-coding | LOC_Os05g01030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g10290 LOC_Os02g07630 LOC_Os03g56820 LOC_Os04g46940 LOC_Os03g56810 LOC_Os02g07060 LOC_Os01g09670 LOC_Os02g12794 LOC_Os02g12800 LOC_Os04g45670 LOC_Os01g09460 More.. |
| Downstream Genes | LOC_Os12g29660 LOC_Os12g43363 LOC_Os06g45500 LOC_Os06g46000 LOC_Os05g05220 LOC_Os06g36740 LOC_Os06g37440 LOC_Os07g37100 LOC_Os10g37420 LOC_Os10g36870 LOC_Os07g37110 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5819 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01030.1 |
| Rice Genome Annotation | LOC_Os05g01030.1 |
| Ricechip | LOC_Os05g01030.1 |
| KEGG | osa:4337521 dosa:Os05t0100600-02 |
| Entrez-Gene | 4337521 |