RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01110.1 View Network Show in Genome Browser |
| Other Names | Os05g0101400 |
| Description | ribosomal protein L28 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 97343-99802 Nucleotide Length: 414 |
| Protein-coding | LOC_Os05g01110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59060 LOC_Os03g10060 LOC_Os01g54540 LOC_Os03g15870 LOC_Os01g48690 LOC_Os01g44210 LOC_Os03g62630 LOC_Os03g22780 LOC_Os03g60100 LOC_Os03g24020 LOC_Os03g34040 More.. |
| Downstream Genes | LOC_Os05g37884 LOC_Os09g10760 LOC_Os07g36090 LOC_Os05g09400 LOC_Os06g09910 LOC_Os06g22690 LOC_Os06g43900 LOC_Os06g21530 LOC_Os05g27100 LOC_Os06g46930 LOC_Os08g21330 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01110.1 |
| Rice Genome Annotation | LOC_Os05g01110.1 |
| Ricechip | LOC_Os05g01110.1 |
| KEGG | osa:4337526 dosa:Os05t0101400-01 |
| Entrez-Gene | 4337526 |