RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01250.1 View Network Show in Genome Browser |
| Other Names | Os05g0102900 |
| Description | SNF7 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 174438-177600 Nucleotide Length: 699 |
| Protein-coding | LOC_Os05g01250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g38300 LOC_Os03g01810 LOC_Os03g43860 LOC_Os01g18280 LOC_Os02g14860 LOC_Os03g18690 LOC_Os01g16146 LOC_Os02g47440 LOC_Os03g18380 LOC_Os03g58010 |
| Downstream Genes | LOC_Os07g13270 LOC_Os07g29630 LOC_Os06g43590 LOC_Os10g33660 LOC_Os07g23200 LOC_Os11g47710 LOC_Os09g09480 LOC_Os06g40620 LOC_Os12g02830 LOC_Os11g03060 LOC_Os06g07978 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01250.1 |
| Rice Genome Annotation | LOC_Os05g01250.1 |
| Ricechip | LOC_Os05g01250.1 |
| KEGG | osa:4337536 dosa:Os05t0102900-01 |
| Entrez-Gene | 4337536 |