RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01262.1 View Network Show in Genome Browser |
| Other Names | Os05g0103100 |
| Description | translocon-associated protein beta domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 182375-184800 Nucleotide Length: 594 |
| Protein-coding | LOC_Os05g01262 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g48930 LOC_Os02g58220 LOC_Os04g24520 LOC_Os01g40570 LOC_Os02g58590 LOC_Os03g29910 LOC_Os02g55440 LOC_Os03g57790 LOC_Os01g59990 |
| Downstream Genes | LOC_Os09g36860 LOC_Os08g37444 LOC_Os08g10480 LOC_Os07g12250 LOC_Os09g12600 LOC_Os05g44310 LOC_Os06g50154 LOC_Os07g07240 LOC_Os05g51700 LOC_Os05g40820 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01262.1 |
| Rice Genome Annotation | LOC_Os05g01262.1 |
| Ricechip | LOC_Os05g01262.1 |
| KEGG | osa:4337538 dosa:Os05t0103100-01 |
| Entrez-Gene | 4337538 |