RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01270.1 View Network Show in Genome Browser |
| Other Names | Os05g0103200 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 185622-188487 Nucleotide Length: 753 |
| Protein-coding | LOC_Os05g01270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g56840 LOC_Os03g62630 LOC_Os03g01090 LOC_Os02g02750 LOC_Os02g48740 LOC_Os01g33080 LOC_Os01g72800 LOC_Os05g01240 LOC_Os04g30430 LOC_Os02g01010 LOC_Os03g59640 More.. |
| Downstream Genes | LOC_Os07g37830 LOC_Os08g29370 LOC_Os06g22690 LOC_Os06g23440 LOC_Os11g09280 LOC_Os06g10280 LOC_Os12g34890 LOC_Os12g32240 LOC_Os07g40580 LOC_Os07g02210 LOC_Os10g39620 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01270.1 |
| Rice Genome Annotation | LOC_Os05g01270.1 |
| Ricechip | LOC_Os05g01270.1 |
| KEGG | osa:4337539 dosa:Os05t0103200-01 |
| Entrez-Gene | 4337539 |