RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01350.1 View Network Show in Genome Browser |
| Other Names | Os05g0104000 |
| Description | retrotransposon protein, putative, unclassified, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 213567-217690 Nucleotide Length: 2493 |
| Protein-coding | LOC_Os05g01350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51600 |
| Downstream Genes | LOC_Os11g14220 LOC_Os10g35470 LOC_Os10g27340 LOC_Os07g38730 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846a-5p osa-miR1846b-5p osa-miR1846c-5p osa-miR1858a osa-miR1858b |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01350.1 |
| Rice Genome Annotation | LOC_Os05g01350.1 |
| Ricechip | LOC_Os05g01350.1 |
| KEGG | osa:4337546 dosa:Os05t0104000-00 |
| Entrez-Gene | 4337546 |