RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01480.1 View Network Show in Genome Browser |
| Other Names | Os05g0105100 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 284970-287694 Nucleotide Length: 663 |
| Protein-coding | LOC_Os05g01480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12730 LOC_Os03g24220 LOC_Os01g37800 LOC_Os03g09140 LOC_Os03g59590 LOC_Os03g16900 LOC_Os02g47440 LOC_Os01g54590 LOC_Os01g62570 LOC_Os02g48000 |
| Downstream Genes | LOC_Os08g42000 LOC_Os05g44050 LOC_Os07g09680 LOC_Os07g41180 LOC_Os07g33850 LOC_Os06g35814 LOC_Os07g31370 LOC_Os07g16970 LOC_Os05g28290 LOC_Os06g21340 LOC_Os05g23860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01480.1 |
| Rice Genome Annotation | LOC_Os05g01480.1 |
| Ricechip | LOC_Os05g01480.1 |
| KEGG | osa:4337555 dosa:Os05t0105100-01 |
| Entrez-Gene | 4337555 |