RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01490.1 View Network Show in Genome Browser |
| Other Names | Os05g0105200 |
| Description | ras-related protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 287362-288834 Nucleotide Length: 621 |
| Protein-coding | LOC_Os05g01490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12730 LOC_Os03g09140 LOC_Os03g60530 LOC_Os01g54590 LOC_Os03g05280 LOC_Os01g67040 LOC_Os03g16900 LOC_Os02g47440 LOC_Os02g46150 LOC_Os01g34200 LOC_Os03g01230 More.. |
| Downstream Genes | LOC_Os07g09680 LOC_Os08g42000 LOC_Os07g41180 LOC_Os06g35814 LOC_Os05g44050 LOC_Os07g31370 LOC_Os07g13530 LOC_Os05g38630 LOC_Os07g16970 LOC_Os05g44070 LOC_Os10g31830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01490.1 |
| Rice Genome Annotation | LOC_Os05g01490.1 |
| Ricechip | LOC_Os05g01490.1 |
| KEGG | osa:4337556 dosa:Os05t0105200-01 |
| Entrez-Gene | 4337556 |