RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01500.1 View Network Show in Genome Browser |
| Other Names | Os05g0105300 |
| Description | tubulin-specific chaperone E, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 291425-296877 Nucleotide Length: 1641 |
| Protein-coding | LOC_Os05g01500 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51600 LOC_Os04g59560 LOC_Os03g48930 LOC_Os03g07080 LOC_Os02g57150 LOC_Os01g36920 LOC_Os01g36890 LOC_Os02g10020 LOC_Os03g11970 LOC_Os03g45920 LOC_Os03g56810 More.. |
| Downstream Genes | LOC_Os11g14220 LOC_Os10g36490 LOC_Os07g38730 LOC_Os05g46560 LOC_Os11g42160 LOC_Os10g27230 LOC_Os05g26660 LOC_Os06g47000 LOC_Os07g13280 LOC_Os07g32480 LOC_Os10g05800 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01500.1 |
| Rice Genome Annotation | LOC_Os05g01500.1 |
| Ricechip | LOC_Os05g01500.1 |
| KEGG | osa:4337557 dosa:Os05t0105300-01 |
| Entrez-Gene | 4337557 |