RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os05g01600.1 View Network Show in Genome Browser |
Other Names | Os05g0106600 |
Description | actin, putative, expressed |
Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 354130-356618 Nucleotide Length: 1134 |
Protein-coding | LOC_Os05g01600 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
GO:0030154 | cell differentiation | Biological Process | IEA | |
GO:0016049 | cell growth | Biological Process | IEA | |
GO:0016043 | cellular component organization | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0007275 | multicellular organismal development | Biological Process | IEA | |
GO:0009791 | post-embryonic development | Biological Process | IEA | |
GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0005198 | structural molecule activity | Molecular Function | IEA | |
GO:0005618 | cell wall | Cellular Component | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005856 | cytoskeleton | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005739 | mitochondrion | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os01g73310 LOC_Os03g61970 LOC_Os04g09860 LOC_Os01g62040 LOC_Os03g22900 LOC_Os03g08050 LOC_Os03g08020 LOC_Os03g08010 LOC_Os02g38920 LOC_Os02g20850 LOC_Os03g56460 More.. |
Downstream Genes | LOC_Os11g06390 LOC_Os10g36650 LOC_Os07g08170 LOC_Os08g28190 LOC_Os06g08770 LOC_Os06g14510 LOC_Os06g37180 LOC_Os07g42450 LOC_Os05g36290 LOC_Os11g14220 LOC_Os12g43340 More.. |
Database Links | |
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Gramene | LOC_Os05g01600.1 |
Rice Genome Annotation | LOC_Os05g01600.1 |
Ricechip | LOC_Os05g01600.1 |
KEGG | osa:4337566 dosa:Os05t0106600-01 |
Entrez-Gene | 4337566 |