RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01780.1 View Network Show in Genome Browser |
| Other Names | Os05g0108300 |
| Description | STE_PAK_Ste20++TranslationKinase_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 471400-476283 Nucleotide Length: 1866 |
| Protein-coding | LOC_Os05g01780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35010 LOC_Os02g05630 LOC_Os04g37904 LOC_Os02g55560 LOC_Os04g56450 LOC_Os02g15594 LOC_Os04g52000 LOC_Os02g22780 LOC_Os03g18150 LOC_Os02g08364 LOC_Os04g58180 More.. |
| Downstream Genes | LOC_Os06g48300 LOC_Os06g33549 LOC_Os07g32380 LOC_Os10g39540 LOC_Os06g44210 LOC_Os06g33530 LOC_Os11g10100 LOC_Os05g04360 LOC_Os07g06820 LOC_Os08g45240 LOC_Os06g19470 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR167d-5p osa-miR167e-5p osa-miR167f osa-miR167g osa-miR167h-5p osa-miR167i-5p osa-miR167j
|
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01780.1 |
| Rice Genome Annotation | LOC_Os05g01780.1 |
| Ricechip | LOC_Os05g01780.1 |
| KEGG | osa:4337579 dosa:Os05t0108300-01 |
| Entrez-Gene | 4337579 |