RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01940.1 View Network Show in Genome Browser |
| Other Names | Os05g0110000 |
| Description | zinc finger, RING-type, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 537846-539668 Nucleotide Length: 1161 |
| Protein-coding | LOC_Os05g01940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g57470 LOC_Os02g50130 LOC_Os03g18150 LOC_Os04g48850 LOC_Os01g70790 LOC_Os03g55540 LOC_Os04g46240 LOC_Os02g43820 LOC_Os04g58810 LOC_Os03g50280 LOC_Os02g09980 More.. |
| Downstream Genes | LOC_Os06g46950 LOC_Os12g39400 LOC_Os05g47650 LOC_Os09g25760 LOC_Os09g37080 LOC_Os06g14420 LOC_Os05g13580 LOC_Os12g03420 LOC_Os05g47960 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01940.1 |
| Rice Genome Annotation | LOC_Os05g01940.1 |
| Ricechip | LOC_Os05g01940.1 |
| KEGG | osa:4337586 dosa:Os05t0110000-01 |
| Entrez-Gene | 4337586 |