RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01950.1 View Network Show in Genome Browser |
| Other Names | Os05g0110100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 542156-542984 Nucleotide Length: 396 |
| Protein-coding | LOC_Os05g01950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14040 LOC_Os01g68480 LOC_Os01g58049 LOC_Os03g63950 LOC_Os01g28540 LOC_Os02g51470 LOC_Os03g62630 LOC_Os03g50810 LOC_Os03g36540 LOC_Os02g38210 LOC_Os03g48030 More.. |
| Downstream Genes | LOC_Os09g34140 LOC_Os06g08670 LOC_Os09g26810 LOC_Os07g37030 LOC_Os09g10750 LOC_Os07g08760 LOC_Os07g04840 LOC_Os07g30670 LOC_Os12g29760 LOC_Os07g38530 LOC_Os05g33080 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01950.1 |
| Rice Genome Annotation | LOC_Os05g01950.1 |
| Ricechip | LOC_Os05g01950.1 |
| KEGG | osa:4337587 dosa:Os05t0110100-01 |
| Entrez-Gene | 4337587 |