RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g01970.4 View Network Show in Genome Browser |
| Other Names | Os05g0110300 |
| Description | NAD dependent epimerase/dehydratase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 552021-561773 Nucleotide Length: 882 |
| Protein-coding | LOC_Os05g01970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15870 LOC_Os02g33450 LOC_Os02g04460 LOC_Os03g08080 LOC_Os03g03360 LOC_Os03g55930 LOC_Os03g17580 LOC_Os03g21900 LOC_Os01g69950 LOC_Os02g08380 LOC_Os04g38750 More.. |
| Downstream Genes | LOC_Os07g33660 LOC_Os09g10760 LOC_Os11g26160 LOC_Os05g27100 LOC_Os11g02450 LOC_Os12g02380 LOC_Os07g38300 LOC_Os12g37610 LOC_Os05g49220 LOC_Os09g38420 LOC_Os06g04150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g01970.4 |
| Rice Genome Annotation | LOC_Os05g01970.4 |
| Ricechip | LOC_Os05g01970.4 |
| KEGG | osa:4337588 dosa:Os05t0110300-01 |
| Entrez-Gene | 4337588 |