RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02020.1 View Network Show in Genome Browser |
| Other Names | Os05g0110900 |
| Description | protein kinase APK1A, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 577144-580488 Nucleotide Length: 1188 |
| Protein-coding | LOC_Os05g02020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os02g15594 LOC_Os04g37904 LOC_Os04g56450 LOC_Os02g55560 LOC_Os02g39290 LOC_Os04g14190 LOC_Os04g52000 LOC_Os03g18890 LOC_Os02g08364 LOC_Os01g37630 More.. |
| Downstream Genes | LOC_Os06g33549 LOC_Os11g47730 LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g44210 LOC_Os06g03540 LOC_Os05g12680 LOC_Os05g23950 LOC_Os12g08070 LOC_Os10g35180 LOC_Os10g39540 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00760 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02020.1 |
| Rice Genome Annotation | LOC_Os05g02020.1 |
| Ricechip | LOC_Os05g02020.1 |
| KEGG | osa:4337593 dosa:Os05t0110900-01 |
| Entrez-Gene | 4337593 |