RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02060.1 View Network Show in Genome Browser |
| Other Names | Os05g0111200 |
| Description | mitochondrial import inner membrane translocase subunit Tim17, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 600302-603321 Nucleotide Length: 441 |
| Protein-coding | LOC_Os05g02060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53240 LOC_Os04g30740 LOC_Os03g18500 LOC_Os03g09870 LOC_Os03g02390 LOC_Os04g15690 LOC_Os03g18870 LOC_Os03g19220 LOC_Os02g10190 LOC_Os04g58330 LOC_Os04g48350 More.. |
| Downstream Genes | LOC_Os12g24580 LOC_Os07g41330 LOC_Os09g37020 LOC_Os05g49170 LOC_Os10g30290 LOC_Os10g37530 LOC_Os07g40620 LOC_Os06g30310 LOC_Os07g44180 LOC_Os06g44190 LOC_Os11g47730 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02060.1 |
| Rice Genome Annotation | LOC_Os05g02060.1 |
| Ricechip | LOC_Os05g02060.1 |
| KEGG | osa:4337595 dosa:Os05t0111200-01 |
| Entrez-Gene | 4337595 |