RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02080.1 View Network Show in Genome Browser |
| Other Names | Os05g0111550 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 612964-619232 Nucleotide Length: 2832 |
| Protein-coding | LOC_Os05g02080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27040 LOC_Os02g48350 LOC_Os03g42750 LOC_Os04g54340 LOC_Os01g59120 LOC_Os04g45040 LOC_Os03g11540 LOC_Os03g60110 LOC_Os03g49200 LOC_Os04g52460 LOC_Os03g42010 More.. |
| Downstream Genes | LOC_Os11g17600 LOC_Os05g19270 LOC_Os06g22080 LOC_Os08g02130 LOC_Os09g24210 LOC_Os10g34750 LOC_Os09g06560 LOC_Os05g05780 LOC_Os11g08330 LOC_Os09g20640 LOC_Os06g07490 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02080.1 |
| Rice Genome Annotation | LOC_Os05g02080.1 |
| Ricechip | LOC_Os05g02080.1 |