RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02250.1 View Network Show in Genome Browser |
| Other Names | Os05g0113400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 716295-718898 Nucleotide Length: 426 |
| Protein-coding | LOC_Os05g02250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51250 LOC_Os01g73310 LOC_Os05g01600 LOC_Os02g53420 LOC_Os03g16920 LOC_Os03g43890 LOC_Os03g22810 LOC_Os02g07490 LOC_Os03g02260 LOC_Os04g58990 LOC_Os03g61970 More.. |
| Downstream Genes | LOC_Os12g43630 LOC_Os11g04070 LOC_Os08g03640 LOC_Os12g03880 LOC_Os06g36700 LOC_Os06g12530 LOC_Os10g23090 LOC_Os07g46990 LOC_Os11g06390 LOC_Os10g36650 LOC_Os08g10450 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2100-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02250.1 |
| Rice Genome Annotation | LOC_Os05g02250.1 |
| Ricechip | LOC_Os05g02250.1 |
| KEGG | osa:4337605 dosa:Os05t0113400-01 |
| Entrez-Gene | 4337605 |