RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02310.1 View Network Show in Genome Browser |
| Other Names | Os05g0114000 |
| Description | soluble inorganic pyrophosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 739646-742966 Nucleotide Length: 651 |
| Protein-coding | LOC_Os05g02310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52940 LOC_Os03g63710 LOC_Os04g55670 LOC_Os03g18020 LOC_Os01g59150 LOC_Os04g59330 LOC_Os01g13080 |
| Downstream Genes | LOC_Os09g32080 LOC_Os05g08370 LOC_Os07g27810 LOC_Os06g45990 LOC_Os08g35710 LOC_Os07g06680 LOC_Os09g32000 LOC_Os07g14850 LOC_Os05g08950 LOC_Os08g42040 LOC_Os09g36350 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | P61-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02310.1 |
| Rice Genome Annotation | LOC_Os05g02310.1 |
| Ricechip | LOC_Os05g02310.1 |
| KEGG | osa:4337608 dosa:Os05t0114000-01 |
| Entrez-Gene | 4337608 |