RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02350.1 View Network Show in Genome Browser |
| Other Names | Os05g0114100 |
| Description | endonuclease/exonuclease/phosphatase family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 759008-763806 Nucleotide Length: 1542 |
| Protein-coding | LOC_Os05g02350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g07080 LOC_Os01g48680 LOC_Os02g34884 LOC_Os01g42490 LOC_Os04g45670 LOC_Os02g20850 |
| Downstream Genes | LOC_Os10g27230 LOC_Os12g22620 LOC_Os06g15410 LOC_Os10g26164 LOC_Os11g20384 LOC_Os07g32610 LOC_Os10g36870 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1863a osa-miR1871 osa-miR1863b |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02350.1 |
| Rice Genome Annotation | LOC_Os05g02350.1 |
| Ricechip | LOC_Os05g02350.1 |
| KEGG | dosa:Os05t0114100-00 |