RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02400.1 View Network Show in Genome Browser |
| Other Names | Os05g0114500 |
| Description | RNA recognition motif containing protein, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 788617-791711 Nucleotide Length: 1647 |
| Protein-coding | LOC_Os05g02400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g69970 LOC_Os02g49270 LOC_Os01g33030 LOC_Os03g49210 LOC_Os03g22350 LOC_Os04g50660 LOC_Os02g35060 LOC_Os03g22320 LOC_Os01g43020 LOC_Os03g60930 LOC_Os03g50380 More.. |
| Downstream Genes | LOC_Os07g25440 LOC_Os09g37860 LOC_Os07g46760 LOC_Os12g36950 LOC_Os09g19560 LOC_Os05g48422 LOC_Os12g07300 LOC_Os12g29660 LOC_Os07g43980 LOC_Os10g35280 LOC_Os09g30210 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02400.1 |
| Rice Genome Annotation | LOC_Os05g02400.1 |
| Ricechip | LOC_Os05g02400.1 |
| KEGG | osa:4337610 dosa:Os05t0114500-00 |
| Entrez-Gene | 4337610 |