RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os05g02510.1 View Network Show in Genome Browser |
| Other Names | Os05g0115900 |
| Description | beta-hexosaminidase precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr5 CDS Coordinates (5'-3'): 864967-870797 Nucleotide Length: 1626 |
| Protein-coding | LOC_Os05g02510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35160 LOC_Os04g52280 LOC_Os02g27300 LOC_Os01g28450 LOC_Os02g32490 LOC_Os04g52370 LOC_Os04g47580 LOC_Os03g18070 LOC_Os02g35630 LOC_Os04g45040 LOC_Os03g55200 More.. |
| Downstream Genes | LOC_Os12g18110 LOC_Os09g16920 LOC_Os07g25590 LOC_Os10g29470 LOC_Os10g05660 LOC_Os09g36560 LOC_Os08g43510 LOC_Os08g13030 LOC_Os07g14070 LOC_Os07g14030 LOC_Os07g03730 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00520 rn00531 rn00604 rn00603 rn01100 rn00511 rn00513 |
| Metacyc Pathways | PWY-6573 PWY-6576 |
| Database Links | |
|---|---|
| Gramene | LOC_Os05g02510.1 |
| Rice Genome Annotation | LOC_Os05g02510.1 |
| Ricechip | LOC_Os05g02510.1 |
| KEGG | osa:4337620 dosa:Os05t0115900-01 |
| Entrez-Gene | 4337620 |